Gray leaf spot vs. northern corn leaf blight vs. southern rust

Side-by-side identification of gray leaf spot, northern corn leaf blight and southern rust: lesion shape, colour, position, conditions and management.

Where:
US Corn Belt, Ontario
When:
July–August
Updated:
October 19, 2026
Reading time:
6 min

Short answer

Gray leaf spot makes long, narrow, rectangular tan-to-gray lesions that stop at the leaf veins and start on the lower leaves. Northern corn leaf blight makes much larger cigar-shaped gray-green to tan lesions, 1 to 6 inches (2.5–15 cm) long, that cross veins and turn dusty gray underneath when the fungus sporulates. Southern rust makes small orange to cinnamon pustules packed densely on the upper leaf surface that leave spores on your finger. Gray leaf spot and northern leaf blight overwinter in local corn residue; southern rust does not overwinter in the Corn Belt and blows in from the south. All three respond to the same FRAC 3, 7 and 11 fungicides applied between VT and R2 when the disease is present and moving up the plant.

Comparison table

Gray leaf spotNorthern corn leaf blightSouthern rust
PathogenCercospora zeae-maydisSetosphaeria turcicaPuccinia polysora
Lesion shapeRectangular, narrow, parallel-sidedElliptical, cigar-shaped, tapered endsRound to oval pustule
Size0.2–2 inches (5–50 mm) long1–6 inches (2.5–15 cm) longSmall; smaller than common rust
ColourLight tan early, gray when mature; yellow halo visible when held to the lightGray-green early, pale gray or tan when matureLight orange to cinnamon red; chocolate to black late in season
Bounded by veins?Yes, sharplyNo, crosses veinsNot applicable
Leaf surfaceLesion visible from both sidesLesion visible from both sides; dusty gray spores mostly on the undersidePustules almost all on the upper surface
Where it startsLower leaves, two to three weeks before tasselLower leavesAny leaf; also sheaths, husks and stalks
Rubs off?NoNoSpores rub off orange on a fingernail
Favourable weather70–85 °F (21–29 °C), humidity above 90 percent for 11–13 hours or more64–81 °F (18–27 °C), more than 6 hours of rain or dew80–90 °F (27–32 °C), high humidity
Overwinters here?Yes, in corn residue, two winters or more under no-tillYes, in corn residueNo; wind-borne spores from the Deep South
New cycleAbout 2 weeksNot statedAbout 7 days
Genetic resistanceHybrid ratings widely availableHt single-gene and polygenic resistanceResistant hybrids available

Gray leaf spot

Look for the first lesions on the lowest green leaves two to three weeks before tassel, in the low, still parts of the field and along tree lines where dew lingers. Early lesions are small with a yellow halo that shows when you hold the leaf up to the light; within about two weeks they lengthen into the classic rectangle, 0.2 to 2 inches (5–50 mm) long, and the fungus produces a new crop of spores that moves the disease up to the middle and upper leaves. Mature lesions are pale brown or gray to tan and so sharply bounded by veins that the edges look ruled. Where lesions coalesce they kill whole leaves.

Gray leaf spot needs warmth and long wet periods: 70–85 °F (21–29 °C) with relative humidity above 90 percent for 11 to 13 hours or longer. Rainfall itself matters less than hours of leaf wetness. The fungus survives on residue at or above the soil surface, through at least two winters under no-till in Kansas, which is why severity is greatest in continuous no-till corn and why rotating to soybeans reduces but does not eliminate the inoculum. Kansas State reports losses of 20–30 percent in individual fields with susceptible hybrids under reduced tillage.

Management. Hybrid resistance is the first line of defence. Tillage and rotation cut local inoculum. For fungicide decisions on susceptible hybrids, Kansas State's rule of thumb is to spray when lesions have reached the third leaf below the ear leaf on 50 percent or more of plants, scouting from two to three weeks before tassel; on moderately susceptible hybrids the lesions need to reach the second leaf below the ear and the field should have a disease history, and on highly resistant hybrids a fungicide is generally not economical.

Northern corn leaf blight

Lesions are unmistakable once mature: long elliptical blotches 1 to 6 inches (2.5–15 cm) long, gray-green at first and then pale gray or tan, running across veins rather than between them. In humid weather the fungus sporulates on the lesion, mostly on the underside, giving it a dirty gray, almost sooty look that distinguishes it from a dead patch of leaf. On hybrids with Ht single-gene resistance the lesions are smaller, yellow and may be only linear streaks, which can confuse the picture. Lesions can also form on the outer husk, although the kernels are not infected.

The fungus favours moderate temperatures of 64–81 °F (18–27 °C) with more than six hours of rain or dew, so it tends to show up in cool, wet summers and on irrigated fields. It overwinters in corn residue and spreads by wind and splashing water. At least four races exist; Ht-gene resistance protects against some races and not others, while polygenic resistance covers all races but is less complete.

Management. Choose hybrids with polygenic resistance where the disease recurs, rotate, and reduce surface residue where that fits the system. Several foliar fungicides are labelled; Crop Protection Network (CPN) does not publish a numeric threshold, so apply the same logic as for gray leaf spot: disease present on the leaves below the ear at VT, a susceptible hybrid and a favourable forecast.

Southern rust

Early infections are small circular to oval spots with a light green to yellow halo. They erupt into light orange to cinnamon-red pustules that are smaller than common rust pustules, round rather than elongate, very numerous and almost entirely on the upper leaf surface; pustules also appear on sheaths, husks and stalks. Rub one with a fingernail and the spores come off orange. Late in the season the pustules turn chocolate brown to black and form a ring of dark teliospores around the original pustule, which is when they get confused with tar spot. Common rust, by comparison, has larger and more elongate pustules on both leaf surfaces and is favoured by cooler weather averaging around 70 °F (21 °C), while southern rust takes off at average temperatures around 80 °F (27 °C) with high humidity.

Puccinia polysora does not overwinter in Nebraska or elsewhere in the northern Corn Belt. Urediniospores arrive on wind from the Deep South, typically early to mid-July in Nebraska, and a new generation of pustules forms about every seven days, so a field can go from a few pustules to blighted leaves within a few weeks of favourable weather.

Management. Resistant hybrids are the most cost-effective control for field corn. The fungicide decision is a timing problem: watch the Corn ipmPIPE map for confirmed counties to your south and scout the upper canopy once it is within a state or two. Foliar fungicides are effective and numerous products are labelled; the earlier the disease arrives relative to grain fill on a susceptible hybrid, the more yield is at stake and the stronger the case for a VT–R2 application.

Choosing a fungicide for any of the three

Products with activity on all three diseases come from FRAC Group 3 (DMI triazoles, e.g., propiconazole, prothioconazole), Group 7 (SDHIs, e.g., fluxapyroxad, pydiflumetofen) and Group 11 (QoI strobilurins, e.g., azoxystrobin, pyraclostrobin), usually as premixes. The Corn Disease Working Group rebuilds the CPN efficacy table every year from multi-year, multi-location field trials and rates each active ingredient disease by disease, so check the current table for the disease you actually found rather than assuming a product rated for one covers the others equally. Rates, intervals and preharvest intervals are on the label registered in your state or province. In Ontario, only products with a Health Canada PMRA registration (PCP number) listing the disease may be used; a US registration does not carry over.

Sources

  • Gray leaf spot of corn — Crop Protection Network encyclopedia
  • Gray leaf spot of corn (MF2341) — Kansas State University Research and Extension
  • Northern corn leaf blight of corn — Crop Protection Network encyclopedia
  • Southern rust of corn — Crop Protection Network encyclopedia
  • Southern rust — Nebraska CropWatch plant disease pages
  • Black spots in corn? Southern rust, tar spot and more — Nebraska CropWatch, August 2024
  • Fungicide efficacy for control of corn foliar diseases (CPN-2011) — Corn Disease Working Group

Label first. Always read and follow label directions before buying or using a pesticide, and follow all federal, state or provincial and local regulations — the label is the law. In the US, use products registered by EPA and approved in your state; in Canada, use only products registered by Health Canada's PMRA (PCP number) and check the current label in the PMRA label search. Products, rates and restrictions differ between countries and between states and provinces.

This guide is educational and does not replace a site-specific recommendation from your agronomist or Certified Crop Adviser. Reference to a product is not an endorsement over similar products; users assume responsibility for use in accordance with current label directions. Last updated October 19, 2026.